PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS64841.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ERF
Protein Properties Length: 146aa    MW: 15828.7 Da    PI: 9.7883
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS64841.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.2e-2081129254
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                 +++GVr++k +g+W+AeIrdp++   +kr++lg++ taeeA +a++a r+++e
  EPS64841.1  81 KFRGVRQRK-WGKWAAEIRDPVK---HKRVWLGTYSTAEEASRAYEAKRLEFE 129
                 79******9.**********754...5***********************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381234.1E-311146IPR017392AP2/ERF transcription factor ERF/PTI6
CDDcd000181.37E-2181128No hitNo description
SuperFamilySSF541712.16E-1781128IPR016177DNA-binding domain
PROSITE profilePS5103220.25781138IPR001471AP2/ERF domain
SMARTSM003804.0E-2081144IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.8E-2381128IPR001471AP2/ERF domain
PfamPF008474.8E-1381130IPR001471AP2/ERF domain
PRINTSPR003671.3E-108293IPR001471AP2/ERF domain
PRINTSPR003671.3E-10104120IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    Send to blast
IRIVCSDPYA TDTSDDEGVS GKKMKRIIKE VCISSADVIL LPESEEHSSV HGSSNAERPP  60
RKKDSSAAAA KLNGRAAASG KFRGVRQRKW GKWAAEIRDP VKHKRVWLGT YSTAEEASRA  120
YEAKRLEFEA LAGSNGTPAA VTNETA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-1574122756Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00217DAPTransfer from AT1G68550Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070810.14e-49ethylene-responsive transcription factor ERF118-like
TrEMBLS8CJL31e-101S8CJL3_9LAMI; Uncharacterized protein (Fragment)
STRINGXP_009799139.16e-41(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.24e-27ERF family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]