PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS65189.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family WRKY
Protein Properties Length: 101aa    MW: 11136.7 Da    PI: 10.7035
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS65189.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.78.9e-324096359
                -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY  3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++er+ + +++++itY+g H+h 
  EPS65189.1 40 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIERALDGTTALVITYKGVHDHG 96
                9*******************************************************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-322398IPR003657WRKY domain
SuperFamilySSF1182902.48E-283298IPR003657WRKY domain
PROSITE profilePS5081131.1923398IPR003657WRKY domain
SMARTSM007745.7E-353897IPR003657WRKY domain
PfamPF031061.1E-244095IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    Send to blast
EIGRQKKNSS SSSSSSSLLK PGKKPKFVVH AADDVGISGD GYRWRKYGQK MVKGNPHPRN  60
YYRCTSAGCP VRKHIERALD GTTALVITYK GVHDHGMPVP R
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-282698274WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028079096.14e-52probable WRKY transcription factor 32
SwissprotP595835e-49WRK32_ARATH; Probable WRKY transcription factor 32
TrEMBLS8CDY81e-68S8CDY8_9LAMI; Uncharacterized protein (Fragment)
STRINGXP_008242986.14e-51(Prunus mume)
STRINGEMJ052984e-51(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA91892127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.13e-48WRKY DNA-binding protein 32
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]