PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS65511.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 141aa    MW: 16023.3 Da    PI: 10.0171
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS65511.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.26.2e-1396141353
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                 r+h   Er+RR++iN+++  L +l+P+      +K++K++iL  ++eY+++
  EPS65511.1  96 RNHVLSERKRREKINERLLILGSLIPSG-----GKVDKVSILDYTIEYLRQ 141
                 679999********************98.....8**************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.53593141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.45E-1496140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-1396141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-1096141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.32E-1196141No hitNo description
SMARTSM003532.1E-799141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    Send to blast
IIDTHYQTVL SNLLKSSHQF VLGPYFKNRN RESSFTRWAP DGFVGGASRV HRNVQPSQSL  60
LKKVLTEVPR LCLTCGSETV KESCNSRPVA ADENDRNHVL SERKRREKIN ERLLILGSLI  120
PSGGKVDKVS ILDYTIEYLR Q
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1101106ERKRRE
2102107RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072770.13e-46transcription factor EGL1-like
TrEMBLS8CL851e-99S8CL85_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.A00733.1.p6e-45(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45762435
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41315.11e-27bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]