PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS66072.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family WRKY
Protein Properties Length: 251aa    MW: 28147.2 Da    PI: 9.1493
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS66072.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.71.3e-29101160159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs +d+++v+ tYegeHnh 
  EPS66072.1 101 VKDGYQWRKYGQKQTRDNPCPRAYFKCAFApSCPVKKKVQRSIDDQTIVVATYEGEHNHA 160
                 58***************************99****************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.7E-2896160IPR003657WRKY domain
PROSITE profilePS5081124.50196159IPR003657WRKY domain
SuperFamilySSF1182901.7E-2498160IPR003657WRKY domain
SMARTSM007743.7E-33101161IPR003657WRKY domain
PfamPF031062.4E-24102159IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
TALESELKRV KQENRKLTEL LNLVRRNYSD LKSKQSGEHE NHGNNNKKRK TSEGSADHDG  60
SESISSDEDS TRIMPKEEHR IKERISRVFI KTDGSDKSLI VKDGYQWRKY GQKQTRDNPC  120
PRAYFKCAFA PSCPVKKKVQ RSIDDQTIVV ATYEGEHNHA ECHPRSNRNS DVTNPMRHST  180
SASAAAATAA LGLIDNNDKR REEKAREEEG SAVTNVESDA GELHRLLAER MATTLTRDPM  240
FRAAIAAAIG G
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-181001591371WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006368511.12e-70probable WRKY transcription factor 40
TrEMBLS8E1A40.0S8E1A4_9LAMI; Uncharacterized protein (Fragment)
STRINGPOPTR_0001s03620.16e-70(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.18e-58WRKY DNA-binding protein 40
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]