PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EPS66211.1

Organism

Genlisea aurea

Taxonomic ID

192259

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

Nin-like

Protein Properties

Length: 483aa MW: 53510.6 Da PI: 9.0102

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS66211.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	83.3	2.2e-26	408	458	1	51
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 aek++sl++l++yFs+++kdAAk++gvc+ +LKriCR++GI RWP+Rki++ EPS66211.1 408 AEKHVSLNVLRRYFSGSLKDAAKSIGVCPATLKRICRRHGITRWPSRKINK 458 5899*********************************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	16.415	397	479	IPR003035	RWP-RK domain
Pfam	PF02042	4.0E-23	412	458	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence Send to blast
SLAEKMLSAL NLLKEDAGGG ILLQLWVPVK NGNQYVLSTS EQPYLLDQTL SGYREVSRSF 60 TFSAESKPGS FLGLPGRVFV SKIPEWTSNL MYYNKAEYLR VQHAAEHKVR GSIALPVFEL 120 DSIDSSCCAV LELVTLKEKP NFDLEIGNVH RVLQVNLLTH RNTLYLSKSH RAALSEIADV 180 LCAVCRAHQL PLALTWIPCS YTEDSVDGVS KLCPRGCSSA VRRKSVLCIE NTACYVNDKT 240 MKGFVHACAE HYLEEGSGIV GKALRSNHPF FYPDVKEYHI NEYSLVHHAR KFGLAAALAI 300 RLRSMHTGND DYVLEFFLPP NMTGSAEQQL LLNSLSATMQ RLCRSLRTVS EAELVSMETS 360 DVKSQVGIKP AAELSSNPES TAPGTNDLPC RLGIPGSKQQ IGKKRNTAEK HVSLNVLRRY 420 FSGSLKDAAK SIGVCPATLK RICRRHGITR WPSRKINKAN RSLKKLQSLL HSVEGVKEGL 480 ELE

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence Send to blast

SLAEKMLSAL NLLKEDAGGG ILLQLWVPVK NGNQYVLSTS EQPYLLDQTL SGYREVSRSF  60
TFSAESKPGS FLGLPGRVFV SKIPEWTSNL MYYNKAEYLR VQHAAEHKVR GSIALPVFEL  120
DSIDSSCCAV LELVTLKEKP NFDLEIGNVH RVLQVNLLTH RNTLYLSKSH RAALSEIADV  180
LCAVCRAHQL PLALTWIPCS YTEDSVDGVS KLCPRGCSSA VRRKSVLCIE NTACYVNDKT  240
MKGFVHACAE HYLEEGSGIV GKALRSNHPF FYPDVKEYHI NEYSLVHHAR KFGLAAALAI  300
RLRSMHTGND DYVLEFFLPP NMTGSAEQQL LLNSLSATMQ RLCRSLRTVS EAELVSMETS  360
DVKSQVGIKP AAELSSNPES TAPGTNDLPC RLGIPGSKQQ IGKKRNTAEK HVSLNVLRRY  420
FSGSLKDAAK SIGVCPATLK RICRRHGITR WPSRKINKAN RSLKKLQSLL HSVEGVKEGL  480
ELE

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011073897.1	0.0	protein NLP9
Swissprot	Q9M1B0	0.0	NLP9_ARATH; Protein NLP9
TrEMBL	S8CN52	0.0	S8CN52_9LAMI; Uncharacterized protein (Fragment)
STRING	Migut.N03106.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3981	24	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.2	0.0	Nin-like family protein

Publications ? help Back to Top
Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885]