PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS66754.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ERF
Protein Properties Length: 211aa    MW: 22734.5 Da    PI: 4.6188
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS66754.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.32.5e-153987255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 y+G+r   ++g+Wv+eIr+p++   ++r++lg++ tae+Aa+a++ a ++l+g
  EPS66754.1 39 LYRGIR--TRSGKWVSEIREPRK---TTRIWLGTYTTAEMAAAAYDVATLALKG 87
                69***6..557*********843...5*********************999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.27E-263897No hitNo description
PfamPF008471.3E-83887IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-183996IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.3E-263996IPR001471AP2/ERF domain
SMARTSM003804.9E-2739101IPR001471AP2/ERF domain
PROSITE profilePS5103219.6383995IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MEPHHVAKDK TDSPRVEIPD ANRLSPPAVA SPPSGRHPLY RGIRTRSGKW VSEIREPRKT  60
TRIWLGTYTT AEMAAAAYDV ATLALKGPDA PLNFPHLASS YPVPATLSAG DIRAAAAAIA  120
TSQQPKNPSD GETSDPAAAV PLTNPARSPA IAEEEIFMDE EDIFEMPKLM AEMAEGMLLS  180
PPRINLPADE DESTDAFAGN TILWTYNSDC K
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-1437961273Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00558DAPTransfer from AT5G52020Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010278525.11e-55PREDICTED: ethylene-responsive transcription factor ERF026-like
SwissprotQ9FJ902e-47ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLS8CI851e-151S8CI85_9LAMI; Uncharacterized protein
STRINGXP_010278525.14e-55(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.14e-36ERF family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]
  2. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]