PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS66848.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family HB-other
Protein Properties Length: 153aa    MW: 16569.2 Da    PI: 6.3486
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS66848.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.74.5e-091312454
                S--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox 24 ypsaeereeLAkklgLterqVkvWFqNrRak 54
                yps +++  LA+++gL+++qV++WF N R +
  EPS66848.1  1 YPSDADKHLLARQTGLSKNQVSNWFINARVR 31
                9****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000862.01E-11136No hitNo description
PROSITE profilePS5007111.953135IPR001356Homeobox domain
SuperFamilySSF466892.82E-12143IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.3E-18141IPR009057Homeodomain-like
PfamPF059203.3E-13131IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
YPSDADKHLL ARQTGLSKNQ VSNWFINARV RLWKPMIEEM YQQESKVEGI DEQTPPEQQH  60
RDGTGGGLMQ TPMNVSPPPS SANVSDTSNN RLSGAVSGAS SHSFPGNMYD SSTNQRAVDI  120
ESTVIRFGAS GGDVSLTLGL RHAGNLAPEK SHF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852672.18e-36PREDICTED: BEL1-like homeodomain protein 4
TrEMBLS8DUN51e-110S8DUN5_9LAMI; Uncharacterized protein (Fragment)
STRINGXP_004148064.11e-35(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1566322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23760.32e-28BEL1-like homeodomain 4
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]