PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS67384.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 219aa    MW: 24737.3 Da    PI: 10.5032
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS67384.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.21.1e-115399755
                HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                + Er RR+++ + f+ L+++lP+ +   ++ K  K  i  +Av+YIk+Lq
  EPS67384.1 53 IKERLRREQMSQNFFVLQSMLPSlP---KNVKIAKEKIANEAVNYIKYLQ 99
                67*********************66...*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.54E-1345115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.5574698IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-652104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.2E-95399IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.51E-75399No hitNo description
Gene3DG3DSA:4.10.280.101.9E-1154115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5167110.08149219IPR002912ACT domain
CDDcd021160.00495150187No hitNo description
SuperFamilySSF550211.46E-5150214No hitNo description
Gene3DG3DSA:3.30.70.2601.8E-4152214No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MDDRWKKRQE EAAAKRSSDD STSLRFGRIL KNAADAGGRS SSTGKRKSEG NLIKERLRRE  60
QMSQNFFVLQ SMLPSLPKNV KIAKEKIANE AVNYIKYLQG EASRLESKKA QFEEATMAEA  120
VAMRRCGNSS SKSSSPPLVR VFIPRTARFF AVECPNRPGT VTHILKVFEN HEAEVLEARI  180
SVDDRRELLT FTSTLLLLPT DDAPATLDRL RNEILLLRI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLS8CJP81e-158S8CJP8_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA132481415
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.33e-07bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]