PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS68575.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ERF
Protein Properties Length: 225aa    MW: 24474.3 Da    PI: 8.7995
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS68575.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-193280355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++GVr ++ +gr++AeIrdp +   ++r++lg+f++ae+Aa+a++aa+++l+g
  EPS68575.1 32 FRGVRKRP-WGRYAAEIRDPLK---KTRVWLGTFDSAEDAARAYDAAALSLRG 80
                8*******.**********743...5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.15E-193188No hitNo description
PfamPF008475.6E-133180IPR001471AP2/ERF domain
SMARTSM003803.2E-373194IPR001471AP2/ERF domain
PROSITE profilePS5103223.8543188IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.8E-323288IPR001471AP2/ERF domain
PRINTSPR003672.4E-103243IPR001471AP2/ERF domain
SuperFamilySSF541715.36E-223289IPR016177DNA-binding domain
PRINTSPR003672.4E-105470IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MGRGRAAAAA RQSDAVQGGA GNGSGVSKEI RFRGVRKRPW GRYAAEIRDP LKKTRVWLGT  60
FDSAEDAARA YDAAALSLRG PKAKINFPLP GNGGATDFNS RNPNQPQIVN YHGDSFMGPE  120
YYPQQQILAQ LRPTSSGMSS TVESFSRPRP MQQPTLTQQQ PRRYHRSPPM APDDCHSDCD  180
SSSSVVDNAE CDTAPSCRKP LPFDLNMLPP GGGDADDYCC TVLRL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-231795379Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00194DAPTransfer from AT1G50640Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012849126.11e-83PREDICTED: ethylene-responsive transcription factor 3-like
SwissprotQ9SXS88e-45ERF3_TOBAC; Ethylene-responsive transcription factor 3
TrEMBLS8CPB01e-165S8CPB0_9LAMI; Ethylene-responsive-element-binding factor 8
STRINGMigut.M01719.1.p4e-83(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33302347
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.12e-29ethylene responsive element binding factor 3
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]