PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS68643.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family C2H2
Protein Properties Length: 51aa    MW: 5627.2 Da    PI: 9.7932
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS68643.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H222.53e-07628123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C++C+ksF+++  +  H++ H
  EPS68643.1  6 YECKYCDKSFKSRQAFGGHQNAH 28
                99*****************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.51E-9335No hitNo description
Gene3DG3DSA:3.30.160.601.4E-6433IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139121.5E-7629IPR007087Zinc finger, C2H2
PROSITE profilePS5015713.464633IPR007087Zinc finger, C2H2
PROSITE patternPS000280828IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 51 aa     Download sequence    Send to blast
ESDRIYECKY CDKSFKSRQA FGGHQNAHKN ERPVKKRSAG GGLGSSCSSF S
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLS8DZ751e-28S8DZ75_9LAMI; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13342714
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.14e-11zinc finger protein 4
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]