PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EPS69048.1

Organism

Genlisea aurea

Taxonomic ID

192259

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

G2-like

Protein Properties

Length: 250aa MW: 28224.7 Da PI: 7.4998

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS69048.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	35.3	2.5e-11	211	234	2	25
G2-like 2 prlrWtpeLHerFveaveqLGGse 25 pr+rWt+ LH+rFv+ave LGG+e EPS69048.1 211 PRMRWTSSLHARFVHAVELLGGHE 234 9*********************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	3.1E-8	209	234	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence Send to blast
MMPINGIFLE PCSSQVPDLS LQISPPNCDS SFSKNRSIPS IDLSSRRKPL SDGDFTELSL 60 AHPTTRLREE EEEEEEEKQE QNPFGHAFQS QTRVNGELES RPIKGIPVYP NRPFPFLALD 120 KDPKMRFYHH QMPYFKGGLD NQAPFLNLGS SGGGASRFVG GNLSGGGYHY YNYYHHPHHQ 180 YGLGQEGSHH VGMIRSRFLS KIPAKRNMRA PRMRWTSSLH ARFVHAVELL GGHESELDLP 240 SNNLLLQSTV

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011085885.1	6e-59	transcription repressor KAN1 isoform X1
Refseq	XP_020551952.1	4e-59	transcription repressor KAN1 isoform X2
Refseq	XP_022853842.1	2e-59	transcription repressor KAN1-like isoform X3
TrEMBL	S8E077	0.0	S8E077_9LAMI; Uncharacterized protein
STRING	Migut.K01107.1.p	5e-52	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2468	23	55

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	1e-26	G2-like family protein

Publications ? help Back to Top
Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885]