PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS69073.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family HSF
Protein Properties Length: 463aa    MW: 51660.5 Da    PI: 4.8768
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS69073.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind114.85.5e-3681002103
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d++++ ++sws+ +nsfvv++  efa++ LpkyFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+k+ll++i+
    EPS69073.1   8 FLSKTYDMVDDPATDPVVSWSSGNNSFVVWNVPEFARDFLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGHKHLLKNIN 95 
                   9****************************************************************999.........******************** PP

                   XXXXX CS
  HSF_DNA-bind  99 rkkse 103
                   r+ks+
    EPS69073.1  96 RRKSS 100
                   **987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.102.1E-38497IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467851.77E-35497IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004151.9E-60497IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000561.7E-19831IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004473.4E-31897IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000561.7E-194658IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS0043404771IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000561.7E-195971IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009408Biological Processresponse to heat
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    Send to blast
SAVSPPPFLS KTYDMVDDPA TDPVVSWSSG NNSFVVWNVP EFARDFLPKY FKHNNFSSFV  60
RQLNTYGFRK VDPDRWEFAN EGFLRGHKHL LKNINRRKSS HIQGMQTPGQ VQNSSISSFI  120
EVGKFGMDEE VEMLKRDKNV LMQELVRLRQ QQQSTENHLQ TVGQRVHLME QRQQQMMSFL  180
AKAMQSPRFV AKLVQQQNGA SRQISGGNKK RRIPSQNGED SVHNSSVVSP DVQIVKYQPL  240
MNEAAKAMLR QVLNRGSPNR VESEFSNDTG FLIGNTSPPH GITDTGSSSD KMSEVTLSEE  300
LHTSAALIET QPSSEFVQLE FDHAFSKSMA GLQDLTPGQG VSLLRNPDVP DSSFKQVDSN  360
YGDTISSFGD APVPIESDEV YADEDVGSID DIHKLPGIND VFWEQFLSES SLAGDADYIN  420
PVNLAQNDVI DPDNEQELEW GKLKNLSNLT EQMGLLASVS KSG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ldu_A4e-26610018123Heat shock factor protein 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator that specifically binds DNA of heat shock promoter elements (HSE). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00514DAPTransfer from AT5G16820Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Not induced by heat stress. {ECO:0000269|PubMed:18064488}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011084620.10.0heat stress transcription factor A-1-like
SwissprotQ84T611e-149HSFA1_ORYSJ; Heat stress transcription factor A-1
TrEMBLS8E0960.0S8E096_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.F00088.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA50542137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16820.21e-135heat shock factor 3
Publications ? help Back to Top
  1. Chauhan H,Khurana N,Agarwal P,Khurana P
    Heat shock factors in rice (Oryza sativa L.): genome-wide expression analysis during reproductive development and abiotic stress.
    Mol. Genet. Genomics, 2011. 286(2): p. 171-87
    [PMID:21792744]
  2. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]