PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS69168.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family G2-like
Protein Properties Length: 324aa    MW: 35635.2 Da    PI: 6.8732
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS69168.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like62.86.6e-20170225155
     G2-like   1 kprlrWtpeLHerFveaveqLG.GsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 k+r++Wt +LH++F++a+e+L   +ek  Pk+il++mk  ++t+ +v+SHLQkYRl
  EPS69168.1 170 KKRIVWTDKLHAEFIHAIEKLRkDKEKISPKRILQVMKNSDVTRGQVASHLQKYRL 225
                 68*******************62467899**************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.19E-14167226IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.0E-20168226IPR009057Homeodomain-like
TIGRFAMsTIGR015571.8E-19170226IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MDCVAANSDS SKSSRKLLFL AVEFSEKSLK EFTKKLLKDY IGKTCSSLER AFDLVQKKTI  60
EFEFIICDSR SAASRLDLVE IIGLKHNVLV IIVLDEDEAL KMAITVGLRN GAFYCFTTPE  120
DVGKIPSLLS GKRTAPASGR NDDEASGSGL KDCKDGDNSG GIDSYTTPRK KRIVWTDKLH  180
AEFIHAIEKL RKDKEKISPK RILQVMKNSD VTRGQVASHL QKYRLQKGIN MQEDSVEYHQ  240
NDDVPQPTVQ ISSTAAAAVE PTGSWVVGNS QTGGGYEGPS SMAHQQRQRV TSSNVVQQTV  300
QPPFGDQTGG QPLDDDLWSD HTVG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLS8E0H10.0S8E0H1_9LAMI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.13e-14response regulator 12
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]