PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS69929.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family AP2
Protein Properties Length: 202aa    MW: 22960.6 Da    PI: 10.0152
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS69929.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.61.1e-112278155
         AP2  1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                s+y+GV++++++gr++A+++d  +   g  rk  + g ++ +e Aak ++ a++k++g
  EPS69929.1 22 SQYRGVTRHRWTGRFEAHLWDnSCVkPGqTRKGKQGG-YDDEERAAKSYDLAALKYWG 78
                78*******************5555555545888866.7777**************98 PP
2AP249.11.4e-15122173256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g+
  EPS69929.1 122 AYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRGA 173
                 69***************988532...5*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.31E-132288IPR016177DNA-binding domain
CDDcd000189.50E-162288No hitNo description
PfamPF008474.3E-82278IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-112387IPR001471AP2/ERF domain
SMARTSM003801.1E-202392IPR001471AP2/ERF domain
PROSITE profilePS5103216.7922386IPR001471AP2/ERF domain
PRINTSPR003673.1E-72435IPR001471AP2/ERF domain
SuperFamilySSF541714.12E-18121182IPR016177DNA-binding domain
CDDcd000183.60E-23121182No hitNo description
PROSITE profilePS5103218.927122180IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.9E-19122180IPR001471AP2/ERF domain
SMARTSM003808.9E-33122186IPR001471AP2/ERF domain
PfamPF008472.3E-10122172IPR001471AP2/ERF domain
PRINTSPR003673.1E-7162182IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
SIEEVMELVS RKSLDSFGQR SSQYRGVTRH RWTGRFEAHL WDNSCVKPGQ TRKGKQGGYD  60
DEERAAKSYD LAALKYWGPT THINFPLSTY EKELQEMKNM SRQEFVAHLR RKSSGFSRGA  120
SAYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGASAITNFD  180
ISRYDVKKIC SSSEVTGPEL AK
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072652.11e-124AP2-like ethylene-responsive transcription factor AIL1, partial
RefseqXP_012460575.11e-124PREDICTED: AP2-like ethylene-responsive transcription factor AIL1
SwissprotQ1PFE11e-119AIL1_ARATH; AP2-like ethylene-responsive transcription factor AIL1
TrEMBLS8CRS41e-149S8CRS4_9LAMI; Uncharacterized protein (Fragment)
STRINGGorai.012G011800.11e-124(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA87772127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.11e-116AP2 family protein
Publications ? help Back to Top
  1. Todd J,Post-Beittenmiller D,Jaworski JG
    KCS1 encodes a fatty acid elongase 3-ketoacyl-CoA synthase affecting wax biosynthesis in Arabidopsis thaliana.
    Plant J., 1999. 17(2): p. 119-30
    [PMID:10074711]
  2. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]