PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EPS70828.1

Organism

Genlisea aurea

Taxonomic ID

192259

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

bZIP

Protein Properties

Length: 474aa MW: 51863.6 Da PI: 8.8934

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS70828.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.9	6.1e-10	185	226	4	45
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L EPS70828.1 185 QKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 226 6889*************************9877777766555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.6E-9	182	245	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.438	184	228	IPR004827	Basic-leucine zipper domain
CDD	cd14708	1.47E-22	186	238	No hit	No description
Pfam	PF00170	6.4E-7	186	226	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.56E-7	186	229	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.7E-8	187	231	No hit	No description
PROSITE pattern	PS00036	0	189	204	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	1.6E-31	268	343	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence Send to blast
MGSSTTLNFG VGDTNRAAPR MPSFISQPPV SNPMGSESTA GQASTISDFG VLEQYLGFRI 60 GEPTNVNRVP TFNPNVNRQT AAPAPQSNSP EKNIVSASSS FPGALLLGAA QSWKGPNANV 120 AIYSSAPVAQ NENWSESNMA DSSSRTDTST DADPDDKNQK FEAGQSAGLT ASDSSNKSKE 180 KTQDQKTLRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGIFISSMR 240 DQTNATNPNG AMSFDSEYAR WLDEQNKHVN ELRTAVNAHA GDTELRTIVD GVSAHFNDIF 300 RVKGNAAKTD VFHILSGMWK TPAERCFLWI GGFRPSELLK LLVNQLENLT EQQVNGLYNL 360 QQTSHQAEDA LSQGMEALQQ SLAETLADGS SPSSGPDGSS GNVGNYMGQM AMAMGKLGSL 420 EGFLKQADNL RQQTLQQMHR ILTTRQSARA LLLISDYFSR LRALSSLWLA RPRE

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence Send to blast

MGSSTTLNFG VGDTNRAAPR MPSFISQPPV SNPMGSESTA GQASTISDFG VLEQYLGFRI  60
GEPTNVNRVP TFNPNVNRQT AAPAPQSNSP EKNIVSASSS FPGALLLGAA QSWKGPNANV  120
AIYSSAPVAQ NENWSESNMA DSSSRTDTST DADPDDKNQK FEAGQSAGLT ASDSSNKSKE  180
KTQDQKTLRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGIFISSMR  240
DQTNATNPNG AMSFDSEYAR WLDEQNKHVN ELRTAVNAHA GDTELRTIVD GVSAHFNDIF  300
RVKGNAAKTD VFHILSGMWK TPAERCFLWI GGFRPSELLK LLVNQLENLT EQQVNGLYNL  360
QQTSHQAEDA LSQGMEALQQ SLAETLADGS SPSSGPDGSS GNVGNYMGQM AMAMGKLGSL  420
EGFLKQADNL RQQTLQQMHR ILTTRQSARA LLLISDYFSR LRALSSLWLA RPRE

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011075425.1	0.0	transcription factor TGA2.3 isoform X1
Swissprot	O24160	0.0	TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBL	S8E509	0.0	S8E509_9LAMI; Uncharacterized protein
STRING	XP_009759888.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA820	23	85

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.5	1e-132	TGACG motif-binding factor 6

Publications ? help Back to Top
Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885]