PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS71066.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family NAC
Protein Properties Length: 183aa    MW: 20333.7 Da    PI: 8.4825
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS71066.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM46.61.1e-1437160128
         NAM  60 fFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                  F+ ++++ + g + nr++++gyWk tgk+k +++ +++ +g  +t +fy+g +++  +t+W+m+e+++
  EPS71066.1   3 LFHAAESQVQGGGQLNRVARDGYWKRTGKEKLIYRDDERRIGFLRTSAFYTGLRSNEFRTHWMMDEFTA 71 
                 58899999999*****************************************99999**********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.929194IPR003441NAC domain
SuperFamilySSF1019413.79E-17493IPR003441NAC domain
PfamPF023651.0E-51570IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MVLFHAAESQ VQGGGQLNRV ARDGYWKRTG KEKLIYRDDE RRIGFLRTSA FYTGLRSNEF  60
RTHWMMDEFT ADGVSDRRGR KESEKFALCK IYINPRHRGN PDANLDRQPV DTNVAPTSEQ  120
GGRDTDALAN LDRQPFDANA APASHNKAAE LLMHLDMSDA LGRAGPDRPI PTGLAPILGP  180
GQG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLS8D1521e-133S8D152_9LAMI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44350.23e-12NAC domain containing protein 61
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]