PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EPS71676.1

Organism

Genlisea aurea

Taxonomic ID

192259

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

bZIP

Protein Properties

Length: 248aa MW: 27395 Da PI: 4.1478

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS71676.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.4	1e-10	141	197	3	59
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 + k+ +r +NR AA rsR+RKk+++ eLe k+ eae k+L l+ + e ++l EPS71676.1 141 DAKKRKRQLRNRDAAVRSRERKKQYVTELEMKSRYYEAECKRLGMMLQYYVAENQAL 197 6799***********************************999987777766666655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.6E-5	139	203	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	6.1E-11	140	201	No hit	No description
PROSITE profile	PS50217	10.059	141	204	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.6E-8	142	197	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.0E-10	143	198	No hit	No description
CDD	cd14704	5.37E-18	144	195	No hit	No description
PROSITE pattern	PS00036	0	146	161	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0010200	Biological Process	response to chitin
GO:0030968	Biological Process	endoplasmic reticulum unfolded protein response
GO:0005634	Cellular Component	nucleus
GO:0005789	Cellular Component	endoplasmic reticulum membrane
GO:0016021	Cellular Component	integral component of membrane
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence Send to blast
MVDTWLTEGD FDVDWSALLN NGSDALDLLS SSDLLVGGFS ATPDSDGVLS IDDIEQFLMK 60 DDGFEWSRNI FDGALSPVAA LQSPSLSLSD QAKVPSSSPD PDLVEVVTDE EDRVRLPGVN 120 NDEEGSPIAE KKVDDDDVIP DAKKRKRQLR NRDAAVRSRE RKKQYVTELE MKSRYYEAEC 180 KRLGMMLQYY VAENQALQLS LSQKKAFDAA SMPKQESAVL LESLLLGSLL GYMVVGITAC 240 LLLPLLLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	143	162	KRKRQLRNRDAAVRSRERKK

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor involved in endoplasmic reticulum (ER) stress response (PubMed:21223397, PubMed:22050533, PubMed:22199238). Acts downstream of the ER stress sensors IRE1, BZIP39 and BZIP60 to activate BiP chaperone genes (PubMed:22050533, PubMed:22199238). {ECO:0000269\|PubMed:21223397, ECO:0000269\|PubMed:22050533, ECO:0000269\|PubMed:22199238}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00019	PBM	Transfer from AT1G42990	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By dithiothreitol-induced endoplasmic reticulum (ER) stress response (PubMed:22050533, PubMed:21223397). Induced by salt stress (PubMed:22050533). {ECO:0000269\|PubMed:21223397, ECO:0000269\|PubMed:22050533}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012845689.1	1e-47	PREDICTED: bZIP transcription factor 60-like
Swissprot	Q69XV0	4e-24	BZP50_ORYSJ; bZIP transcription factor 50
TrEMBL	S8D2N7	1e-177	S8D2N7_9LAMI; Uncharacterized protein (Fragment)
STRING	Migut.O00838.1.p	4e-47	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7101	21	28

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G42990.1	3e-17	basic region/leucine zipper motif 60

Publications ? help Back to Top
Wakasa Y, et al. Expression of ER quality control-related genes in response to changes in BiP1 levels in developing rice endosperm. Plant J., 2011. 65(5): p. 675-89 [PMID:21223397] Lu SJ, et al. Conservation of IRE1-regulated bZIP74 mRNA unconventional splicing in rice (Oryza sativa L.) involved in ER stress responses. Mol Plant, 2012. 5(2): p. 504-14 [PMID:22199238] Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885]