PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EPS72389.1

Organism

Genlisea aurea

Taxonomic ID

192259

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

bZIP

Protein Properties

Length: 394aa MW: 43463.5 Da PI: 7.5553

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS72389.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.3	1e-10	276	334	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr +r NR +A rs +RK+ +i+eLe kv++L++e ++L +l l+ +a l +++ EPS72389.1 276 KRVKRILANRQSAARSKERKLRYIAELEHKVQTLQTEATTLSAQLTLLQRDSAGLANQN 334 899*********************************************99999887776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.4E-16	272	336	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.588	274	337	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.6E-9	276	334	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.1E-11	276	333	No hit	No description
SuperFamily	SSF57959	3.7E-11	276	327	No hit	No description
CDD	cd14703	3.02E-24	277	328	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence Send to blast
MASARQRLQS SLGASSSSLT TQNQLFAANA AEFQMPPHTG GQIPWSENIG FPPISPYSQI 60 PANRLVDHQV GLPPLIPTHY RDAASMEERD GGGASAFIKP RGVESLPHKA HRRSVSDIPL 120 GFSCTMQSPP PLVCQNRESS LERGEGMGER KSEGEVVDDL FSAYMNLDNI GALNCDDKVG 180 GKDNREDLDS RGSGTKTNES SDNEATSCVN ESGSKRNDVT PRSRHCRSVS MDNFIGKLNE 240 KEAFSMEFGN GEFTGAELKK IVGNKKLAEM ACNDPKRVKR ILANRQSAAR SKERKLRYIA 300 ELEHKVQTLQ TEATTLSAQL TLLQRDSAGL ANQNNELKFR LQSMEQQAQL RDALNEALSC 360 EIQRLKLATN GDATKFHQLS QPYHHQQQQQ PQSQ

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence Send to blast

MASARQRLQS SLGASSSSLT TQNQLFAANA AEFQMPPHTG GQIPWSENIG FPPISPYSQI  60
PANRLVDHQV GLPPLIPTHY RDAASMEERD GGGASAFIKP RGVESLPHKA HRRSVSDIPL  120
GFSCTMQSPP PLVCQNRESS LERGEGMGER KSEGEVVDDL FSAYMNLDNI GALNCDDKVG  180
GKDNREDLDS RGSGTKTNES SDNEATSCVN ESGSKRNDVT PRSRHCRSVS MDNFIGKLNE  240
KEAFSMEFGN GEFTGAELKK IVGNKKLAEM ACNDPKRVKR ILANRQSAAR SKERKLRYIA  300
ELEHKVQTLQ TEATTLSAQL TLLQRDSAGL ANQNNELKFR LQSMEQQAQL RDALNEALSC  360
EIQRLKLATN GDATKFHQLS QPYHHQQQQQ PQSQ

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor with an activatory role.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011088545.1	1e-142	uncharacterized protein LOC105169746
Refseq	XP_011088546.1	1e-142	uncharacterized protein LOC105169746
Swissprot	Q04088	4e-49	POF21_ARATH; Probable transcription factor PosF21
TrEMBL	S8CYB1	0.0	S8CYB1_9LAMI; Uncharacterized protein
STRING	Migut.N01296.1.p	1e-138	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1265	24	78

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	2e-90	bZIP family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885] Xu C, et al. Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration. Nat Plants, 2018. 4(2): p. 108-115 [PMID:29358751]