PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EPS72606.1

Organism

Genlisea aurea

Taxonomic ID

192259

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

bZIP

Protein Properties

Length: 376aa MW: 41384 Da PI: 6.7484

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS72606.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.2	2.4e-10	211	268	5	62
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l l+ l++e EPS72606.1 211 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAE 268 9********************************************9999887777766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.9E-15	207	271	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.749	209	272	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	7.7E-11	211	265	No hit	No description
Pfam	PF00170	5.9E-9	211	263	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	7.74E-11	211	262	No hit	No description
CDD	cd14703	5.72E-26	212	261	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence Send to blast
PPSGRHSVFS PPVKSEQMGS SNLPPLGPAT NSPDQPHLPP HPHTSDSTQF SHDISQMPDN 60 PPKTSGHRRA HSEIITLPDY ISFESDLGVV GGFEGPSLSD ETDEDLLSMY LDMDKLNSSS 120 ATSAFHMGEA SALPGSGSAP TSEHANQSAD YVMPSPTEKP RIRHQHSQSM DGSTSIKPEM 180 LMSGSEDPSH ADSKKAISAA KLAELALIDP KRAKRIWANR QSAARSKERK MRYIAELERK 240 VQTLQTEATS LSAQLTLLQR DTNGLTAENG ELKLRLQTME QQVHLQDALN EALKEEIHHL 300 KLVTGQTIGN GGSMMSFPAS YGANQQYFTD SHALLTAQQL QQLQLHSQKQ FHQFQHPHQD 360 HRAADGKQLR THKDRI

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence Send to blast

PPSGRHSVFS PPVKSEQMGS SNLPPLGPAT NSPDQPHLPP HPHTSDSTQF SHDISQMPDN  60
PPKTSGHRRA HSEIITLPDY ISFESDLGVV GGFEGPSLSD ETDEDLLSMY LDMDKLNSSS  120
ATSAFHMGEA SALPGSGSAP TSEHANQSAD YVMPSPTEKP RIRHQHSQSM DGSTSIKPEM  180
LMSGSEDPSH ADSKKAISAA KLAELALIDP KRAKRIWANR QSAARSKERK MRYIAELERK  240
VQTLQTEATS LSAQLTLLQR DTNGLTAENG ELKLRLQTME QQVHLQDALN EALKEEIHHL  300
KLVTGQTIGN GGSMMSFPAS YGANQQYFTD SHALLTAQQL QQLQLHSQKQ FHQFQHPHQD  360
HRAADGKQLR THKDRI

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor with an activatory role.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00126	DAP	Transfer from AT1G06070	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011091638.1	0.0	probable transcription factor PosF21
Refseq	XP_011091639.1	0.0	probable transcription factor PosF21
Swissprot	Q04088	1e-133	POF21_ARATH; Probable transcription factor PosF21
TrEMBL	S8D5A7	0.0	S8D5A7_9LAMI; Uncharacterized protein (Fragment)
STRING	Migut.G01348.1.p	1e-169	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3965	21	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06070.1	1e-145	bZIP family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885] Xu C, et al. Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration. Nat Plants, 2018. 4(2): p. 108-115 [PMID:29358751]