PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS72657.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 70aa    MW: 8058.57 Da    PI: 8.7706
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS72657.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.42.6e-082411255
                HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  EPS72657.1  2 RREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 41
                9*****************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.792140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.4E-4146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.18E-6245No hitNo description
PfamPF000101.5E-5241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.09E-14260IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-15359IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    Send to blast
ARREKISERM KILQDLVPGC NKVIGKALVL DEIINYIQSL QRQVEFLSMK LEAVNARLNP  60
MTDCFLPKEV
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the control of petal size, by interfering with postmitotic cell expansion to limit final petal cell size. {ECO:0000269|PubMed:16902407}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Isoform 1 is up-regulated by PI/AP3, SEP2, SEP3 and AP1, but repressed by AG. {ECO:0000269|PubMed:16902407}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022775999.13e-37transcription factor BHLH089-like
SwissprotQ0JXE76e-37BPE_ARATH; Transcription factor BPE
TrEMBLS8EJ544e-43S8EJ54_9LAMI; Uncharacterized protein (Fragment)
STRINGAquca_002_00402.15e-37(Aquilegia coerulea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12872471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.11e-39BIG PETAL P
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]