PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EPS72690.1

Organism

Genlisea aurea

Taxonomic ID

192259

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

NAC

Protein Properties

Length: 265aa MW: 30258.4 Da PI: 7.0017

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS72690.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166	1.3e-51	7	131	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lp+GfrFhPtdeelv +yL++k++++++++ +i+e+d+yk++PwdLp + +ekewyfFs+rd+ky++g+r+nra+ gyWkatg dk++ + ++ EPS72690.1 7 LPAGFRFHPTDEELVIHYLCRKCASQSISV-PIIAEIDLYKYNPWDLPGLAMYGEKEWYFFSPRDRKYPNGSRPNRAAGCGYWKATGADKPIGN--PKA 102 799*************************.88***********65556799********************************98..778 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +g+kk Lvfy+g+ap+gekt+W+mheyrl EPS72690.1 103 MGIKKALVFYSGKAPRGEKTNWIMHEYRL 131 *************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.02E-60	4	158	IPR003441	NAC domain
PROSITE profile	PS51005	59.207	7	158	IPR003441	NAC domain
Pfam	PF02365	3.3E-27	8	131	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence Send to blast
AEVELRLPAG FRFHPTDEEL VIHYLCRKCA SQSISVPIIA EIDLYKYNPW DLPGLAMYGE 60 KEWYFFSPRD RKYPNGSRPN RAAGCGYWKA TGADKPIGNP KAMGIKKALV FYSGKAPRGE 120 KTNWIMHEYR LAGVDRSARK KGSNLRLDDW VLCRIYNKKG AVERTAEVTS DHEMKPEILT 180 SSPMAYDDHL EYLDASDSVV PPESSCSEHV MSPEVESLPT PKLTEWDRRS FPAEYYFHGQ 240 FPPALHGYDH VEQMQGMLGY ITKPF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	2e-79	1	164	9	174	Stress-induced transcription factor NAC1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012844117.1	1e-130	PREDICTED: NAC domain-containing protein 2-like
Swissprot	Q39013	1e-111	NAC2_ARATH; NAC domain-containing protein 2
TrEMBL	S8D049	0.0	S8D049_9LAMI; Uncharacterized protein (Fragment)
STRING	Migut.C01110.1.p	1e-129	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1239	24	81

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	1e-114	NAC family protein

Publications ? help Back to Top
Florentin A,Damri M,Grafi G Stress induces plant somatic cells to acquire some features of stem cells accompanied by selective chromatin reorganization. Dev. Dyn., 2013. 242(10): p. 1121-33 [PMID:23798027] Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885] Jensen MK, et al. ATAF1 transcription factor directly regulates abscisic acid biosynthetic gene NCED3 in Arabidopsis thaliana. FEBS Open Bio, 2013. 3: p. 321-7 [PMID:23951554] Wang YX Characterization of a novel Medicago sativa NAC transcription factor gene involved in response to drought stress. Mol. Biol. Rep., 2013. 40(11): p. 6451-8 [PMID:24057250] Yang X, et al. Overexpression of a Miscanthus lutarioriparius NAC gene MlNAC5 confers enhanced drought and cold tolerance in Arabidopsis. Plant Cell Rep., 2015. 34(6): p. 943-58 [PMID:25666276] Du Q,Wang H The role of HD-ZIP III transcription factors and miR165/166 in vascular development and secondary cell wall formation. Plant Signal Behav, 2015. 10(10): p. e1078955 [PMID:26340415] Takasaki H, et al. SNAC-As, stress-responsive NAC transcription factors, mediate ABA-inducible leaf senescence. Plant J., 2015. 84(6): p. 1114-23 [PMID:26518251] Liu Y,Sun J,Wu Y Arabidopsis ATAF1 enhances the tolerance to salt stress and ABA in transgenic rice. J. Plant Res., 2016. 129(5): p. 955-962 [PMID:27216423] Ghandchi FP,Caetano-Anolles G,Clough SJ,Ort DR Investigating the Control of Chlorophyll Degradation by Genomic Correlation Mining. PLoS ONE, 2016. 11(9): p. e0162327 [PMID:27618630] Zhao J,Missihoun TD,Bartels D The ATAF1 transcription factor is a key regulator of aldehyde dehydrogenase 7B4 (ALDH7B4) gene expression in Arabidopsis thaliana. Planta, 2018. 248(4): p. 1017-1027 [PMID:30027414]