PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS73235.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ERF
Protein Properties Length: 135aa    MW: 15359.3 Da    PI: 8.6775
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS73235.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-2070120255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp++ g  +r++lg+++ta eAaka+++a+ kl+g
  EPS73235.1  70 RYRGVRQRP-WGKFAAEIRDPKKKG--TRVWLGTYDTAVEAAKAYDRAAFKLRG 120
                 7********.**********96643..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.28E-2870129No hitNo description
SuperFamilySSF541714.84E-2370130IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.9E-3270129IPR001471AP2/ERF domain
SMARTSM003804.4E-3870134IPR001471AP2/ERF domain
PROSITE profilePS5103223.90770128IPR001471AP2/ERF domain
PfamPF008472.1E-1470120IPR001471AP2/ERF domain
PRINTSPR003676.6E-117182IPR001471AP2/ERF domain
PRINTSPR003676.6E-1194110IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
MASPDESSAL EIIRQHLLDY DDRSFAEAYS LPPHCGDLHL AISRIDGEGE EPAVRREKRR  60
AAVVEEYSRR YRGVRQRPWG KFAAEIRDPK KKGTRVWLGT YDTAVEAAKA YDRAAFKLRG  120
CKAIVNFPHE IDPSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-2868132367ATERF1
3gcc_A3e-2868132367ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022034941.11e-39ethylene-responsive transcription factor 5-like
TrEMBLS8D1G04e-94S8D1G0_9LAMI; Uncharacterized protein
STRINGGorai.001G051200.12e-35(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9632389
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.15e-33ERF family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]