PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS73993.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ERF
Protein Properties Length: 155aa    MW: 16614.7 Da    PI: 8.4366
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS73993.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.6e-19555255
         AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                +ykGVr ++ +g+Wv+eIr p   + k++r++lg++ t+e Aa+a++aa ++l+g
  EPS73993.1  5 KYKGVRMRS-WGSWVSEIRAP---NpKTRRIWLGSYSTPEAAARAYDAALLCLKG 55
                8*****998.**********9...8889************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381233.9E-181143IPR017392AP2/ERF transcription factor ERF/PTI6
PROSITE profilePS5103222.352565IPR001471AP2/ERF domain
SMARTSM003806.3E-29571IPR001471AP2/ERF domain
CDDcd000187.81E-18567No hitNo description
Gene3DG3DSA:3.30.730.102.0E-27566IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-18566IPR016177DNA-binding domain
PfamPF008476.9E-12555IPR001471AP2/ERF domain
PRINTSPR003671.9E-8617IPR001471AP2/ERF domain
PRINTSPR003671.9E-82945IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MKKNKYKGVR MRSWGSWVSE IRAPNPKTRR IWLGSYSTPE AAARAYDAAL LCLKGSSAAP  60
NLNFPVSTTP PLPHLPPTPS PKSIQKLAAA AAAAADSTFS SAAAATSTPA AEQPPSYSFD  120
SPNYNDMMLT GTLFDPLMME DDGGDDIRLW SFSSD
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in the regulation of plant development and tolerance to abiotic stresses (PubMed:21069430). Involved in salt and osmotic stress response pathways. May be regulated by the stress-related genes RD29A, RD22, DREB1A or P5CS during stress response (PubMed:27137403). Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:21069430, ECO:0000269|PubMed:27137403}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by jasmonate (JA) and ethylene. Down-regulated by freezing and heat stresses. {ECO:0000269|PubMed:21069430}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028085106.12e-37ethylene-responsive transcription factor ERF014-like
SwissprotQ9SFE43e-32ERF12_ARATH; Ethylene-responsive transcription factor ERF012
TrEMBLS8EDE71e-107S8EDE7_9LAMI; Uncharacterized protein
STRINGPOPTR_0002s08610.14e-35(Populus trichocarpa)
STRINGGLYMA04G43040.24e-34(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA61772435
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G44830.11e-21ERF family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]
  2. Kazama D,Kurusu T,Mitsuda N,Ohme-Takagi M,Tada Y
    Involvement of elevated proline accumulation in enhanced osmotic stress tolerance in Arabidopsis conferred by chimeric repressor gene silencing technology.
    Plant Signal Behav, 2014. 9(3): p. e28211
    [PMID:24614501]
  3. Kazama D, et al.
    Identification of Chimeric Repressors that Confer Salt and Osmotic Stress Tolerance in Arabidopsis.
    Plants (Basel), 2013. 2(4): p. 769-85
    [PMID:27137403]