PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS74183.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 171aa    MW: 19232.3 Da    PI: 9.6006
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS74183.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.11e-101061454
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54
                  + +Er RR+++++ +++L +llP++   + +K +s  ++  +AveYI +L
  EPS74183.1 10 IRSDAERDRRKKMKHLYSTLSSLLPPPQDSSVTKrVSIPATISRAVEYIPEL 61
                56789*********************886777777**************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.64E-7466No hitNo description
SuperFamilySSF474597.98E-11578IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.262661IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-10765IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.0E-81162IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.9E-71267IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MVDENEKKKI RSDAERDRRK KMKHLYSTLS SLLPPPQDSS VTKRVSIPAT ISRAVEYIPE  60
LEKRVEGMIS ERQSLLLKKL SRRRRNCLAH HLTVTPINDE LTVVQISAEA RCDSSFSEAV  120
MVLEMDGFVV LSASSFASSS GPTLLTLHLK SQLKCDPEKV HEKLKPLFAA C
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1620KKKIRSDAERDRRKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLS8EDX01e-120S8EDX0_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22262256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.18e-12bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]