PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS74246.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ARR-B
Protein Properties Length: 204aa    MW: 23447.8 Da    PI: 8.5063
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS74246.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like70.42.9e-22143192454
     G2-like   4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                  +Wt eLH++F+ av+qL G+ +  Pk+ilelm+v+gLt+ +v+SHLQk R
  EPS74246.1 143 TEWTAELHDKFMAAVQQL-GEGRCFPKEILELMNVPGLTRMQVASHLQKCR 192
                 58****************.9*****************************98 PP
2Response_reg30.61.7e-1148529109
                   ESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTT.HHHHHHHHHTTESEEEESS--HHHHHH CS
  Response_reg  29 addgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahge.eedalealkaGakdflsKpfdpeelvk 109
                   ++ +++a++ l++ +  ++li+  i+ p+ + l+l+++ ++ e  +pii+ t+ +e +  + +a+++Ga  +l+Kp + e + +
    EPS74246.1   4 VSLARDAIDVLRAGKtrFHLIIANINSPDGQFLQLVQQAATTE--TPIILTTSWNEdPLHVRQAIELGAFMYLAKPLKSETMAN 85 
                   55567788888766667**************999999998877..*******8888577788999***********99988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011018.725191IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:3.40.50.23001.5E-131122No hitNo description
CDDcd001568.55E-8191No hitNo description
PfamPF000723.0E-6485IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521723.56E-12794IPR011006CheY-like superfamily
PROSITE profilePS5129411.589135196IPR017930Myb domain
SuperFamilySSF466899.41E-17138192IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.0E-22139193IPR009057Homeodomain-like
TIGRFAMsTIGR015577.5E-20143193IPR006447Myb domain, plants
PfamPF002493.6E-8144191IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
VEQVSLARDA IDVLRAGKTR FHLIIANINS PDGQFLQLVQ QAATTETPII LTTSWNEDPL  60
HVRQAIELGA FMYLAKPLKS ETMANMWQHL LREDLRRKRD AEIFAKSADD SFGGIEKERR  120
RRLKREGDDV AAPAKEVKRK ECTEWTAELH DKFMAAVQQL GEGRCFPKEI LELMNVPGLT  180
RMQVASHLQK CRNDNWRSPE ERRA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196123RKRDAEIFAKSADDSFGGIEKERRRRLK
2118125RRRRLKRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011079700.16e-60two-component response regulator ARR14-like
TrEMBLS8D9N51e-150S8D9N5_9LAMI; Uncharacterized protein (Fragment)
STRINGXP_009798262.19e-52(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-28response regulator 12
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]