PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS74403.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family HRT-like
Protein Properties Length: 325aa    MW: 36269.1 Da    PI: 9.7955
Description HRT-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS74403.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HRT-like51.51.7e-16253282231
    HRT-like   2 CGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                 CGv+++ GsvCk++Pv+gRKRC+ HKGmR+
  EPS74403.1 253 CGVAIGGGSVCKAPPVEGRKRCALHKGMRV 282
                 *****************************7 PP
2HRT-like42.31.3e-13297325230
    HRT-like   2 CGviledGsvCkrqPvkgRKRCeeHKGmR 30 
                 CG++ledG++C++ +v+ +KRC eHKG+R
  EPS74403.1 297 CGLLLEDGTCCEKMAVPRNKRCLEHKGRR 325
                 ***************************99 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:2000033Biological Processregulation of seed dormancy process
GO:0097100Molecular Functionsupercoiled DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
AMAVPSAVRL RREEFRRTKH DAAFSPWKIL VGDSDWKDHS RGKEGTERYR TQNLPNWTSC  60
PGVYELGIAT TPSGDQDPRK LDADSVIPVY LGQADNLRTR LQSYGRNGAH LETPSLNDDT  120
FPPEKGLKLF TAIFSRALPI AYRCAPMKSK TEAERTEKQL LETFDYAWNK GSNGARRVDD  180
IYRKLDHRTE ATRFSVLADR LFGFFVNRKK VGIEIGAPDR GKKTWKVFGI KRVQQQVQDH  240
DDHDHHHDRD VCCGVAIGGG SVCKAPPVEG RKRCALHKGM RVNGGAGGGA GGGGERCGLL  300
LEDGTCCEKM AVPRNKRCLE HKGRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848581.11e-125PREDICTED: uncharacterized protein LOC105968493
TrEMBLS8EEL60.0S8EEL6_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.J00591.1.p1e-125(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA77412330
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56780.14e-69effector of transcription2
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]