PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC001065.20
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 179aa    MW: 19932.8 Da    PI: 5.8353
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC001065.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY383.4e-121402359
                  EEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY 23 sYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
                  +YYrCt+    gC ++k+v+rs++dp+v+e+tY   H+++
  EcC001065.20  1 NYYRCTHGkdrGCLARKRVQRSDDDPSVFEVTYCRAHTCN 40
                  5******87889*************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031061.4E-11139IPR003657WRKY domain
SMARTSM007747.2E-8141IPR003657WRKY domain
PROSITE profilePS5081112.071137IPR003657WRKY domain
SuperFamilySSF1182905.36E-11141IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.1E-11141IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004523Molecular FunctionRNA-DNA hybrid ribonuclease activity
GO:0005515Molecular Functionprotein binding
GO:0043531Molecular FunctionADP binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
NYYRCTHGKD RGCLARKRVQ RSDDDPSVFE VTYCRAHTCN HHSLQIIQPQ PQQNQTHLQD  60
IALDFRGSLT VITPNLDSNN DDHNFCSSMF NFPPTSDNTS SVMSNNSNFP STPQFLSRST  120
SETNYLSESP ARLEGFQVGP SFGTSESELA MIVLAATSEN NSQATVRSDS NLPLHGISW
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018732595.15e-98PREDICTED: probable disease resistance protein At4g27220
TrEMBLA0A059B9I71e-114A0A059B9I7_EUCGR; Uncharacterized protein (Fragment)
STRINGXP_010068019.11e-97(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.13e-12WRKY DNA-binding protein 46