PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC003343.30
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 523aa    MW: 59158.7 Da    PI: 7.4221
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC003343.30genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.12.1e-29174233159
                   ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                   ++Dg++WrKYGqK  kg+++pr+YYrCt    Cpv+k+v+r+ ed +++++tYeg+Hnh+
  EcC003343.30 174 MNDGCQWRKYGQKISKGNPCPRAYYRCTVVpACPVRKQVQRCPEDMSILTTTYEGTHNHP 233
                   58**************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.0E-31159235IPR003657WRKY domain
SuperFamilySSF1182902.22E-26167235IPR003657WRKY domain
PROSITE profilePS5081127.393169235IPR003657WRKY domain
SMARTSM007741.3E-34174234IPR003657WRKY domain
PfamPF031061.3E-25175233IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0055114Biological Processoxidation-reduction process
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
GO:0016702Molecular Functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 523 aa     Download sequence    Send to blast
VFSSYKKKAS LEEGREKKPD KEMLKLVEKD PPYPLQMRMF DILQQEAREI SSSNSSNEEA  60
DEKPQLVSLC LGRSQHMNDK KETDESGDPT QDIKTSLTLG LDFKGEFSSK LAPDPHRKSR  120
LELGNPDEEE GKETCLSSRI RKTTCDGEEN EVSQQEQVKR ARVCVRARCD TPTMNDGCQW  180
RKYGQKISKG NPCPRAYYRC TVVPACPVRK QVQRCPEDMS ILTTTYEGTH NHPLPVSARA  240
MASTTSAAAS MLLSSSSTSN SDQSSLSGST FHTGPSFSTY DSYSRSRAIF LHPNPASALN  300
PTITLDLTDD APPSASTMSH FKSKSNIGPT SLLGYDYTSG RPMLMPSYVR AQAGPFSQEK  360
QPQQEQINRG TTGDKYQQSY SQQSLTETLT KMXXXXXXXX XXXXXXXXXX XXXXXXXXXX  420
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  480
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXFVHID VVY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-201742351777Probable WRKY transcription factor 4
2lex_A6e-201742351777Probable WRKY transcription factor 4
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010029291.10.0PREDICTED: probable WRKY transcription factor 72
TrEMBLA0A059AQQ50.0A0A059AQQ5_EUCGR; Uncharacterized protein
STRINGXP_010029291.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18860.12e-42WRKY DNA-binding protein 61