PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC003696.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 435aa    MW: 48306.7 Da    PI: 7.8268
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC003696.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.24.7e-10150190545
                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                   k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  EcC003696.10 150 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 190
                   788*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-8146209IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415148192IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.03E-7150193No hitNo description
PfamPF001703.3E-7150190IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-7151194No hitNo description
PROSITE patternPS000360153168IPR004827Basic-leucine zipper domain
PfamPF141441.2E-31232307IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0005739Cellular Componentmitochondrion
GO:0009941Cellular Componentchloroplast envelope
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004252Molecular Functionserine-type endopeptidase activity
GO:0004672Molecular Functionprotein kinase activity
GO:0005509Molecular Functioncalcium ion binding
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
GSEGNVVQSN QNTDFGSFEH SLGFRIEDAI NLSRNPVFNQ IKTNGRALGT DIQARAFNKS  60
VVASERDQSS TASASQRIPL QKESQANLLS IPGGRSENWG DSNMADTSPR TDSSSDDTDD  120
RNQRLEAGPS AALGASDSSG RSKEKAVDQK TLRRLAQNRE AARKSRLRKK AYVQQLESSR  180
LKLTQLEQEL QRARQQGIFI SSSGDQSHSS NGNGAMAFDV EYARWLEEQN RHINELRSAV  240
NSHVGDTELR IIVDNVTTHF DDIYRLKDTA AKADVFHILS GMWKTPAERC FLWIGGFRSS  300
ELLKLLISQL EPLTDQQMMG LYNLQQTSQQ AEDALSQGME ALQQSLAETL ANSPPGSTES  360
SGNVANYMGQ MAMAMGKLGT LEGFLRQADN LRQQTLLQMH RLLTTRQSAR ALLAIHDYFS  420
RLRALSSLWL ARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010036355.10.0PREDICTED: transcription factor TGA2.3 isoform X2
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A059DHK90.0A0A059DHK9_EUCGR; Uncharacterized protein
STRINGXP_010036354.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-137bZIP family protein