PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC004248.20
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB_related
Protein Properties Length: 151aa    MW: 17256.9 Da    PI: 5.0221
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC004248.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.11.1e-091242448
                     HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
                     W++Ia +++ gRt++q+k++w+++l
     EcC004248.20  1 WSLIAGRVP-GRTDNQVKNHWNTHL 24
                     *********.************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd001671.05E-6124No hitNo description
PfamPF002492.2E-7124IPR001005SANT/Myb domain
SuperFamilySSF466891.88E-8133IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.5E-12134IPR009057Homeodomain-like
PROSITE profilePS5129419.105128IPR017930Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0015976Biological Processcarbon utilization
GO:0003677Molecular FunctionDNA binding
GO:0004089Molecular Functioncarbonate dehydratase activity
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
WSLIAGRVPG RTDNQVKNHW NTHLRKKLGT GNFKRPRSDP KPEYRAQEEQ ETADHHHPIN  60
DSNAGNCDRL PPCRSTMSNT SADDAEVGDV LMRENFLTGS EGSDGEEWMR DHRVWLGSPM  120
LSSDRYFELS SVGLEDLVID SYSLDQMWQQ L
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010044624.11e-105PREDICTED: transcription factor WER
TrEMBLA0A059D8G81e-104A0A059D8G8_EUCGR; Uncharacterized protein
STRINGXP_010044624.11e-104(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.12e-13myb domain protein 66