PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC005501.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 87aa    MW: 9553.98 Da    PI: 10.4536
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC005501.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.6e-20251255
           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                  +ykGVr++k +g+Wv+eIr+p   gk++r++lg++ ++e+Aa+a++ a++ l+g
  EcC005501.10  2 RYKGVRRRK-WGKWVSEIREP---GKKTRIWLGSYESPEMAAAAYDVAALHLRG 51
                  6*****998.**********8...557*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.53E-20161No hitNo description
SuperFamilySSF541715.62E-23260IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.9E-31260IPR001471AP2/ERF domain
PROSITE profilePS5103223.499259IPR001471AP2/ERF domain
SMARTSM003803.8E-36265IPR001471AP2/ERF domain
PfamPF008474.1E-14251IPR001471AP2/ERF domain
PRINTSPR003671.2E-12314IPR001471AP2/ERF domain
PRINTSPR003671.2E-124161IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    Send to blast
ARYKGVRRRK WGKWVSEIRE PGKKTRIWLG SYESPEMAAA AYDVAALHLR GPGAALNFPE  60
LVEALPKPAG SSSEAVQMAA QEAALRF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-17364668ATERF1
3gcc_A8e-17364668ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
139KGVRRRK
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010064857.11e-54PREDICTED: ethylene-responsive transcription factor ERF022
SwissprotQ9C9I21e-39ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLA0A059BV843e-53A0A059BV84_EUCGR; Uncharacterized protein
STRINGXP_010064857.16e-54(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.16e-37ERF family protein