PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC006043.60
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 140aa    MW: 15857.1 Da    PI: 10.3571
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC006043.60genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.92.2e-132272457
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57
                   k+ +r+ +NRe+ArrsR RK++ +e L++++ +Le eN   ++ ++ +k++v+
  EcC006043.60 22 EKKRKRMLSNRESARRSRMRKQKHLEDLTREMGVLEREN---REIIKAYKEKVQ 72
                  6999***********************************...688899999988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.4E-111990IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.7E-92163No hitNo description
PROSITE profilePS5021710.1972163IPR004827Basic-leucine zipper domain
PfamPF001701.2E-102372IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.21E-102369No hitNo description
CDDcd147021.98E-132463No hitNo description
PROSITE patternPS0003602641IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006396Biological ProcessRNA processing
GO:0055114Biological Processoxidation-reduction process
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MMSLLQGSSG SDADARYLGT DEKKRKRMLS NRESARRSRM RKQKHLEDLT REMGVLEREN  60
REIIKAYKEK VQGHLGLQSE NEALLAEKAA LMNHLNGMES MIGSFNKSGP CQRFSSAVQE  120
PWQVHSSSQQ IMASASMSRI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13542RRSRMRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010024787.13e-95PREDICTED: bZIP transcription factor 53
TrEMBLA0A059B5F86e-94A0A059B5F8_EUCGR; Uncharacterized protein
STRINGXP_010024787.11e-94(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.11e-19basic region/leucine zipper motif 53