PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC008532.20
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 219aa    MW: 23529.2 Da    PI: 5.6762
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC008532.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.3e-182877255
           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                  +ykGVr +  +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  EcC008532.20 28 KYKGVRMRT-WGSWVSEIRAP---NQKARIWLGSYATAEAAARAYDAALLCLKG 77
                  8*****998.**********9...336************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.0E-272791IPR001471AP2/ERF domain
SMARTSM003802.0E-292896IPR001471AP2/ERF domain
PfamPF008472.0E-112877IPR001471AP2/ERF domain
SuperFamilySSF541713.07E-172890IPR016177DNA-binding domain
CDDcd000189.76E-142890No hitNo description
PROSITE profilePS5103221.6282890IPR001471AP2/ERF domain
PRINTSPR003671.3E-82940IPR001471AP2/ERF domain
PRINTSPR003671.3E-85167IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MVKRSSEPKI QPEPPKRTSP SSAPACRKYK GVRMRTWGSW VSEIRAPNQK ARIWLGSYAT  60
AEAAARAYDA ALLCLKGSSA ASAPHGLNFP RSSLAHRIPD HATPMSPKSI QRVAAAAAAA  120
EEEEGGSLDC AASSPQSPCQ QSPSPSSSSL ASSPSPSPPD HLDDDVVLLP AAEWDDTWCN  180
LEGLLQSPRF LSPMFADGAS SDDYYEEAGD IRLWNWNFC
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018731330.11e-107PREDICTED: ethylene-responsive transcription factor ERF014
TrEMBLA0A059BX871e-106A0A059BX87_EUCGR; Uncharacterized protein
STRINGXP_010064998.11e-106(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM29992767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G44830.11e-26ERF family protein