PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC008749.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family C2H2
Protein Properties Length: 199aa    MW: 23388.7 Da    PI: 9.8169
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC008749.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.3e-05150171223
                   EETTTTEEESSHHHHHHHHHHT CS
       zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                   +C  C+k+F +++  + H+ +H
  EcC008749.10 150 ECRECKKPFDSPHAVNAHQHVH 171
                   7******************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.699149176IPR007087Zinc finger, C2H2
PROSITE patternPS000280151171IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
EARPSDHPDP RWHRFDFFVV VLVARAFGST YRRLPCRLCV NYSNELLKYR EYGCAICTSY  60
EKVLLRSRNQ SPRIMWGRIL RIFQPELVAP FPFRLDRHLP RAVMLVNFQS ESFPAQNRPN  120
QSPARNPPGP KQHDMVWKYA KYNPQNNCWE CRECKKPFDS PHAVNAHQHV HIRQRKEIHK  180
NLDLNKAPVD DGNGNEDGA