PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcC009711.80

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

bZIP

Protein Properties

Length: 436aa MW: 46997.9 Da PI: 10.2436

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcC009711.80	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48	2.7e-15	358	406	5	53
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+ eN++L+k+ e+ EcC009711.80 358 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKDENEELRKKQAEIM 406 79****************************************9877665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.3E-15	354	419	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.45	356	407	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.2E-13	358	407	IPR004827	Basic-leucine zipper domain
CDD	cd14707	5.86E-27	358	412	No hit	No description
SuperFamily	SSF57959	2.19E-11	358	406	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.9E-15	358	407	No hit	No description
PROSITE pattern	PS00036	0	361	376	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence Send to blast
MGSNINFKNF GTDPTPTNNR PPGNTLLTRQ PSVYTLTFEE FQNSIGKDFG SMNMDELIKN 60 IWSAEENQSM ASASGPGGGG GQDGIGVPGG HLQRQGSLTL PRTLSQKTVD EVWKNISKED 120 SVGKDGGLVT GGPVVPQRQQ TLGEMTLEEF LFRAGVVRED AQYSGKPNGG GLFGELPRAG 180 NNAGLEFGFP QPGKAENLMG MRNLEVGNLN SMHPLNMPVN ANANGIRSNQ QQVTQPQAHQ 240 PQILPKQPIL PFSQQIPSPN NTQLNGHGFR GGLMAIPDQV MTNNLVQGGA LHGGGMGMVG 300 LGAGPAGMPT GSPANPVSSD GMGRSNGDTS SVSPVPYVFN GSVRGRKSNS AVEKVVERRQ 360 RRMIKNRESA ARSRARKQAY TMELEAEVAK LKDENEELRK KQAEIMEIQK NQVIEMMNTQ 420 RGAKKRCLRR TQTGPW

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence Send to blast

MGSNINFKNF GTDPTPTNNR PPGNTLLTRQ PSVYTLTFEE FQNSIGKDFG SMNMDELIKN  60
IWSAEENQSM ASASGPGGGG GQDGIGVPGG HLQRQGSLTL PRTLSQKTVD EVWKNISKED  120
SVGKDGGLVT GGPVVPQRQQ TLGEMTLEEF LFRAGVVRED AQYSGKPNGG GLFGELPRAG  180
NNAGLEFGFP QPGKAENLMG MRNLEVGNLN SMHPLNMPVN ANANGIRSNQ QQVTQPQAHQ  240
PQILPKQPIL PFSQQIPSPN NTQLNGHGFR GGLMAIPDQV MTNNLVQGGA LHGGGMGMVG  300
LGAGPAGMPT GSPANPVSSD GMGRSNGDTS SVSPVPYVFN GSVRGRKSNS AVEKVVERRQ  360
RRMIKNRESA ARSRARKQAY TMELEAEVAK LKDENEELRK KQAEIMEIQK NQVIEMMNTQ  420
RGAKKRCLRR TQTGPW

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010061749.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
Swissprot	Q9M7Q4	1e-125	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A059BRK1	0.0	A0A059BRK1_EUCGR; Uncharacterized protein
STRING	XP_010061749.1	0.0	(Eucalyptus grandis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-111	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]