PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcC009915.10

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

GeBP

Protein Properties

Length: 428aa MW: 47696.4 Da PI: 4.7274

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcC009915.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	29.6	2e-09	70	98	2	29
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk.s 29 lfq lw++eDei lL+G++d+++++g s EcC009915.10 70 LFQCLWTDEDEIELLRGFLDYTTQRGRaS 98 69************************853 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF74788	1.67E-6	225	258	IPR016159	Cullin repeat-like-containing domain
SuperFamily	SSF74788	1.67E-6	291	376	IPR016159	Cullin repeat-like-containing domain

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence Send to blast
MARRGRASPD LAMATLPATG EGEGRPRPVA GKAAIAIATS AASPVPPIVG TISPSELKRP 60 SQAVTVTKTL FQCLWTDEDE IELLRGFLDY TTQRGRASPS PVADEGRARW IMASQEDEAA 120 IAKLDSACKD LKALLQRSAD LDRNMEKMDR RFDLIDQSLS LASRRVAPLQ SMAMANKALD 180 TRINRAVTPA LSLLHSFRLF ESLQADIFDL SARLSGEVGP SPNRLRRLLE YVDCVDRLKA 240 AVSSISEEGE PAIQKLQEVV EFLSRTKATD NFRTHRLRET LVTLKALYET EVDAMRFEGL 300 LDEALLQLQD EYEGLLQQLK HENVGEAQEG GDGEFAVSEL GSEQEVEVLR RISETLAAND 360 CLDICIDIFV KVRSDTRIPS EFFANFVYDE AMSCIDIFSD SSRFRFLLVL ILHFMLIPHL 420 FDDTKRIT

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence Send to blast

MARRGRASPD LAMATLPATG EGEGRPRPVA GKAAIAIATS AASPVPPIVG TISPSELKRP  60
SQAVTVTKTL FQCLWTDEDE IELLRGFLDY TTQRGRASPS PVADEGRARW IMASQEDEAA  120
IAKLDSACKD LKALLQRSAD LDRNMEKMDR RFDLIDQSLS LASRRVAPLQ SMAMANKALD  180
TRINRAVTPA LSLLHSFRLF ESLQADIFDL SARLSGEVGP SPNRLRRLLE YVDCVDRLKA  240
AVSSISEEGE PAIQKLQEVV EFLSRTKATD NFRTHRLRET LVTLKALYET EVDAMRFEGL  300
LDEALLQLQD EYEGLLQQLK HENVGEAQEG GDGEFAVSEL GSEQEVEVLR RISETLAAND  360
CLDICIDIFV KVRSDTRIPS EFFANFVYDE AMSCIDIFSD SSRFRFLLVL ILHFMLIPHL  420
FDDTKRIT

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010064158.1	1e-178	PREDICTED: exocyst complex component EXO70A1
TrEMBL	A0A059BK38	1e-177	A0A059BK38_EUCGR; Exocyst subunit Exo70 family protein
STRING	XP_010064158.1	1e-177	(Eucalyptus grandis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	6e-09	DNA-binding storekeeper protein-related transcriptional regulator