PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcC014751.10

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

G2-like

Protein Properties

Length: 158aa MW: 18069.8 Da PI: 4.9839

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcC014751.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.3	2.9e-32	97	150	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+e+AtPk++l+ m+vkgL+++hvkSHLQ+YR+ EcC014751.10 97 PRLRWTPQLHYSFVQAVERLGGQERATPKSVLQQMNVKGLSINHVKSHLQMYRS 150 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	3.1E-30	93	151	IPR009057	Homeodomain-like
PROSITE profile	PS51294	11.74	93	153	IPR017930	Myb domain
SuperFamily	SSF46689	1.0E-15	95	151	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	4.7E-24	97	152	IPR006447	Myb domain, plants
Pfam	PF00249	3.7E-10	98	149	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 158 aa Download sequence Send to blast
MRETMRSLES TEDHQEKSEE KGEKSSPAVS SQKLSSFDLN EEATFDEHDS PAEDDDLISD 60 EDDNSSIREA EDKPGNRNAE SSETMKAARQ YVRSKMPRLR WTPQLHYSFV QAVERLGGQE 120 RATPKSVLQQ MNVKGLSINH VKSHLQMYRS RKLDEVGQ

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	9e-21	98	150	4	56	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	9e-21	98	150	4	56	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	8e-21	98	150	3	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	8e-21	98	150	3	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	8e-21	98	150	3	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	8e-21	98	150	3	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	9e-21	98	150	4	56	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	9e-21	98	150	4	56	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	9e-21	98	150	4	56	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	9e-21	98	150	4	56	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	9e-21	98	150	4	56	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	9e-21	98	150	4	56	Protein PHOSPHATE STARVATION RESPONSE 1
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Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00297	DAP	Transfer from AT2G38300	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010057109.1	2e-97	PREDICTED: uncharacterized protein LOC104445014
Refseq	XP_018728583.1	2e-97	PREDICTED: uncharacterized protein LOC104445014
Refseq	XP_018728584.1	2e-97	PREDICTED: uncharacterized protein LOC104445014
Refseq	XP_018728585.1	2e-97	PREDICTED: uncharacterized protein LOC104445014
TrEMBL	A0A059C6L8	2e-87	A0A059C6L8_EUCGR; Uncharacterized protein
STRING	XP_010057109.1	7e-97	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM363	28	184

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	6e-36	G2-like family protein