PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC015146.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 132aa    MW: 15671.4 Da    PI: 9.6339
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC015146.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.58.3e-171187170
           NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka........eekewyfFskrdkkyat 70
                  lp+G+rFhPtd elv++yLk kv g   ++  +i+evdi+k+ePw+  +++k+        + ++w++F+++ ++ ++
  EcC015146.10 11 LPVGYRFHPTDGELVDHYLKLKVLGFIDNI-CIIPEVDICKWEPWESAQRFKEqsiipsddKVQKWWYFCPKMQRIQR 87
                  799**********************99888.77*************9863333334555435569*****99887665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.8E-16386IPR003441NAC domain
PROSITE profilePS5100515.27511132IPR003441NAC domain
PfamPF023653.7E-91287IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
MMATVIIPEN LPVGYRFHPT DGELVDHYLK LKVLGFIDNI CIIPEVDICK WEPWESAQRF  60
KEQSIIPSDD KVQKWWYFCP KMQRIQRSTH LDIGRRLVLI ELSRLETRID RLVLRKHWSF  120
PRVGALRASR AT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018733122.14e-82PREDICTED: protein BEARSKIN2-like isoform X3
TrEMBLA0A059BC561e-44A0A059BC56_EUCGR; Uncharacterized protein
STRINGXP_010066077.16e-37(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM79671340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.34e-22NAC transcription factor-like 9