PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC015454.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 243aa    MW: 25736.3 Da    PI: 4.3476
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC015454.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.75.8e-182979155
           AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                  s++kGVr +k +g+Wv+eIr p++   r r++lg++++ae+Aa+a +aa  +l+g
  EcC015454.10 29 SKFKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDSAEKAARAFDAAQFCLRG 79
                  79*****999.**********933...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541719.81E-212988IPR016177DNA-binding domain
PfamPF008474.0E-112979IPR001471AP2/ERF domain
CDDcd000185.71E-302989No hitNo description
PROSITE profilePS5103221.973087IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.6E-293088IPR001471AP2/ERF domain
SMARTSM003804.0E-323093IPR001471AP2/ERF domain
PRINTSPR003676.9E-93142IPR001471AP2/ERF domain
PRINTSPR003676.9E-95369IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MSEMAREVVA AAAGAGAGAS EKPADSGDSK FKGVRKRKWG KWVSEIRLPN SRERIWLGSY  60
DSAEKAARAF DAAQFCLRGR NARFNFPDDP PDIAGGRSLT PSEIQVAAAQ FANSAAPAPS  120
AAAAACSDPS RRSSGNRDLS SEYPPAGSEL RAESASSMSD GTPMDCDLGV DVDMNVDMNG  180
PFMELLGSNV GMGSGNYGAD FGLYPGYDPF TMNDFYGHAT IPNGGFGDEN FDGLPVQDFL  240
WNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1430891474Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13137KGVRKRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00151DAPTransfer from AT1G19210Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018725324.11e-132PREDICTED: ethylene-responsive transcription factor ERF017
TrEMBLA0A059CME01e-131A0A059CME0_EUCGR; Uncharacterized protein
STRINGXP_010050433.11e-114(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM16142890
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.11e-48ERF family protein