PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC016415.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 150aa    MW: 17279.7 Da    PI: 9.3666
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC016415.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM70.73.8e-2291343127
           NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                   pGf F+P+d+el ++yL +++++++l+  + i+++d+y   ePw++    k +  + y F+  +kk  + +r  r++ sg Wk   +  + ++ +g 
  EcC016415.10   9 PGFCFKPSDQELFSDYLMRRLNEEPLPDPNLIRDCDVYGGgEPWKIF-D-KDRGGKFYVFTVPKKK--NRSRVDRTAGSGSWKGEQS-SDFKDLQGD 100
                   9************************999999*******866*****6.2.2334466777776665..678************7765.555555899 PP

           NAM  99 lvglkktLvfy.....kgrapkgektdWvmheyr 127
                   ++g kk ++f      +++a k+e+ +W+m ey 
  EcC016415.10 101 VIGYKKLFTFKlkagwSAKADKAENGHWIMYEYL 134
                   **********9888777899999**********5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-216138IPR003441NAC domain
PROSITE profilePS5100522.2977150IPR003441NAC domain
PfamPF023651.9E-159133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
FITMATRHPG FCFKPSDQEL FSDYLMRRLN EEPLPDPNLI RDCDVYGGGE PWKIFDKDRG  60
GKFYVFTVPK KKNRSRVDRT AGSGSWKGEQ SSDFKDLQGD VIGYKKLFTF KLKAGWSAKA  120
DKAENGHWIM YEYLKHPHNV SVSFPFLLGC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-12913317138Stress-induced transcription factor NAC1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010055621.14e-89PREDICTED: NAC domain-containing protein 68-like isoform X2
RefseqXP_018729435.14e-89PREDICTED: NAC domain-containing protein 68-like isoform X1
STRINGXP_010055621.12e-88(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM13343727
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.13e-14NAC domain containing protein 32