PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC016693.30
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB_related
Protein Properties Length: 171aa    MW: 19105.9 Da    PI: 4.4144
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC016693.30genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.12.3e-091242448
                     HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
                     W++Iar+++ gRt++++k++w++++
     EcC016693.30  1 WSRIARKLP-GRTDNEIKNYWRTHM 24
                     *********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd001675.64E-7124No hitNo description
Gene3DG3DSA:1.10.10.603.3E-11125IPR009057Homeodomain-like
SuperFamilySSF466891.88E-6128IPR009057Homeodomain-like
PROSITE profilePS5129417.166128IPR017930Myb domain
PfamPF002491.8E-6123IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006810Biological Processtransport
GO:0016020Cellular Componentmembrane
GO:0003677Molecular FunctionDNA binding
GO:0005215Molecular Functiontransporter activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
WSRIARKLPG RTDNEIKNYW RTHMRKEAQE KKHALSSSSA SSNISSSSSN NPTVDSLTTR  60
ETGKESFYGT GGPGDMLTST EKNIEEQGKS ESACSFDDIW KEIALADGYG ILPVYDGYSE  120
ESCNFSCPPM ASPTMEYNSD PLWLTDEEES KMFPVNQFIP DYEHGLSYIT G
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010043594.11e-106PREDICTED: transcription factor MYB59
TrEMBLA0A059D5W71e-106A0A059D5W7_EUCGR; Uncharacterized protein
STRINGXP_010043594.11e-106(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.16e-33myb domain protein 59