PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC018507.30
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 215aa    MW: 24139.5 Da    PI: 8.4836
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC018507.30genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.7e-112376155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS
           HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55
                  rr+  +++E++RR+r+++ ++ L +llP+ +   +++   s  +   +A++YIk L+
  EcC018507.30 23 RRTERKIIEKNRRNRMKHLYSVLNSLLPSqP---SDQEaRSLPDQIDEAIKYIKGLE 76
                  79999************************76...66666***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.84E-112092IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.08E-62080No hitNo description
PROSITE profilePS5088812.5382275IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.1E-72376IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.2E-92388IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.1E-52881IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0019856Biological Processpyrimidine nucleobase biosynthetic process
GO:0004151Molecular Functiondihydroorotase activity
GO:0009055Molecular Functionelectron carrier activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
MALSLVNVIG KEMERGLQPS TSRRTERKII EKNRRNRMKH LYSVLNSLLP SQPSDQEARS  60
LPDQIDEAIK YIKGLETAVK EAKDKKENRM GKKRPSPSTS SSTLEAVKSP QIEIRVRDSS  120
LEVILTSGLH DQFIFSEILR MLHEEEVEVM NANFSVVGNS VYHLVHAKIG ESSLGAATIS  180
ERLKTFVNGS AADGGHEEFH PKLWDCGLSP NIWNF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010038678.11e-157PREDICTED: uncharacterized protein LOC104427258
TrEMBLA0A059A0H11e-156A0A059A0H1_EUCGR; Uncharacterized protein
STRINGXP_010038678.11e-156(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.16e-31bHLH family protein