PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC019123.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 73aa    MW: 8399.69 Da    PI: 10.6378
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC019123.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM45.32.7e-1435675127
           NAM  75 nratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                   +r+t sg+Wk++g+d +v+++ +++++g+kktLvf++g+ ++g++t  v+hey+
  EcC019123.10   3 KRSTPSGFWKKSGTDWNVKARdTNRVIGTKKTLVFHEGQGSNGVQTYRVIHEYH 56 
                   799****************9977788***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100517.436173IPR003441NAC domain
PfamPF023653.9E-6356IPR003441NAC domain
SuperFamilySSF1019411.7E-13360IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 73 aa     Download sequence    Send to blast
MVKRSTPSGF WKKSGTDWNV KARDTNRVIG TKKTLVFHEG QGSNGVQTYR VIHEYHPLAK  60
MYPIYPHLVI TIN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010065925.14e-23PREDICTED: uncharacterized protein LOC104453109 isoform X1
RefseqXP_010065926.14e-23PREDICTED: uncharacterized protein LOC104453109 isoform X2
TrEMBLA0A058ZU933e-17A0A058ZU93_EUCGR; Uncharacterized protein
TrEMBLA0A059BB605e-17A0A059BB60_EUCGR; Uncharacterized protein
TrEMBLA0A059BC604e-17A0A059BC60_EUCGR; Uncharacterized protein
STRINGXP_010065925.11e-22(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19821971
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01520.15e-14NAC domain containing protein 67