PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC020099.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family C2H2
Protein Properties Length: 161aa    MW: 17580.6 Da    PI: 8.277
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC020099.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.46.1e-067090323
                  ETTTTEEESSHHHHHHHHHHT CS
       zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                  Cp C+k+F++++    H+r+H
  EcC020099.10 70 CPLCNKPFTSQHAVYGHMRVH 90
                  *******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576674.36E-56791No hitNo description
PROSITE profilePS5015710.0766895IPR007087Zinc finger, C2H2
PROSITE patternPS0002807090IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MREGLSTHAA TYGWFYSRAH QRAGTRPISV SSAVRGGAGA EDGGREMNWG EELAFAGGSS  60
AAIMRGRWLC PLCNKPFTSQ HAVYGHMRVH NSLSKLDKEL VSILQELGKP FPSQHAGYEH  120
VPVHNSPSNQ EKEVASILLE LGQLKSDRTE GSETGQQQHR G