PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC021761.20
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 146aa    MW: 17045.3 Da    PI: 6.3416
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC021761.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM108.29.7e-34141351128
           NAM   1 lppGfrFhPtdeelvveyLkkkvegkklel.eev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                   lppGfrF Ptdeelv ++L++k ++ +++    + +++++ ++++PwdL+ k+ ++ +++++Fs+          +nr+t++gyWk    +++v+++
  EcC021761.20  14 LPPGFRFLPTDEELVLHFLRPKKQQASVSSlYAHlVPDLKSHHHDPWDLHGKALSNGTHYFYFSRM--------MNNRITENGYWKDLDMEESVFAE 102
                   79********************99999554133359*************95554544444444443........358******************** PP

           NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    ge +g+kk+L+f+ g+ap+g++t+W+m+ey+l
  EcC021761.20 103 AGEIIGMKKSLTFHIGEAPTGQETNWMMQEYHL 135
                   ********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.35E-3711138IPR003441NAC domain
PROSITE profilePS5100535.89114146IPR003441NAC domain
PfamPF023655.5E-2215135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    Send to blast
IKEKEEDDGK MLKLPPGFRF LPTDEELVLH FLRPKKQQAS VSSLYAHLVP DLKSHHHDPW  60
DLHGKALSNG THYFYFSRMM NNRITENGYW KDLDMEESVF AEAGEIIGMK KSLTFHIGEA  120
PTGQETNWMM QEYHLMSFHQ LVNPTQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A5e-27413610146NAC domain-containing protein 19
3swm_B5e-27413610146NAC domain-containing protein 19
3swm_C5e-27413610146NAC domain-containing protein 19
3swm_D5e-27413610146NAC domain-containing protein 19
3swp_A5e-27413610146NAC domain-containing protein 19
3swp_B5e-27413610146NAC domain-containing protein 19
3swp_C5e-27413610146NAC domain-containing protein 19
3swp_D5e-27413610146NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010027642.11e-103PREDICTED: NAC domain-containing protein 104 isoform X3
TrEMBLA0A059AKC31e-101A0A059AKC3_EUCGR; Uncharacterized protein
STRINGXP_010027642.11e-102(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.17e-39xylem NAC domain 1