PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC021933.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 105aa    MW: 12297.2 Da    PI: 10.6001
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC021933.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM72.31.3e-22219352128
           NAM  52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   + + +ew+fFs++       ++ +r+t sgyWk+tg d++v+++ +g+ +g+kk Lvf+ g+ +kg+kt+Wv+hey+l
  EcC021933.10  21 DDQVREWWFFSPHTP-----QQVKRSTPSGYWKKTGIDRKVKARdNGRIIGTKKFLVFHIGQGKKGVKTNWVIHEYHL 93 
                   34567*******966.....4789******************9988899****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100525.5021105IPR003441NAC domain
PfamPF023652.4E-132593IPR003441NAC domain
SuperFamilySSF1019419.42E-242598IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    Send to blast
IQVVDDKKLV RLTGESIIHR DDQVREWWFF SPHTPQQVKR STPSGYWKKT GIDRKVKARD  60
NGRIIGTKKF LVFHIGQGKK GVKTNWVIHE YHLPTDDVLT LLYSI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-16249368140Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018722506.19e-56PREDICTED: NAC domain-containing protein 62
TrEMBLA0A058ZU936e-58A0A058ZU93_EUCGR; Uncharacterized protein
STRINGXP_010041129.13e-55(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2195845
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01520.11e-20NAC domain containing protein 67