PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC022136.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB_related
Protein Properties Length: 91aa    MW: 10585.3 Da    PI: 9.9111
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC022136.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.66.9e-0963842345
                     -HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwq 45
                     +W++Ia +++ gRt++++k++w+
     EcC022136.10 63 RWALIAGRLP-GRTDNEIKNYWN 84
                     6*********.***********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd001672.25E-65087No hitNo description
SuperFamilySSF466895.46E-76189IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.8E-126287IPR009057Homeodomain-like
PROSITE profilePS500906.1336387IPR017877Myb-like domain
PfamPF002496.3E-76385IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    Send to blast
MIEGRSDFGI INSTLRLLLA HRSFISLNTP PLPNYPVDNI LRIVFKYTHW TALYLEDLVV  60
VERWALIAGR LPGRTDNEIK NYWNANLAKK F
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2108535
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.12e-12myb domain protein 12