PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC022151.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 72aa    MW: 8073.11 Da    PI: 10.9994
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC022151.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.13.5e-211564255
           AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                  +y+GVr ++ +gr++AeIrd ++    ++r++lg+f+t+eeAa a++ a+++l+g
  EcC022151.10 15 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPEEAALAYDGAARSLRG 64
                  69*******.**********883....5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381231.5E-26172IPR017392AP2/ERF transcription factor ERF/PTI6
PfamPF008473.9E-141564IPR001471AP2/ERF domain
PROSITE profilePS5103222.7611572IPR001471AP2/ERF domain
CDDcd000188.45E-261572No hitNo description
SMARTSM003803.4E-311572IPR001471AP2/ERF domain
SuperFamilySSF541715.62E-231572IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.3E-321572IPR001471AP2/ERF domain
PRINTSPR003671.7E-111627IPR001471AP2/ERF domain
PRINTSPR003671.7E-113854IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 72 aa     Download sequence    Send to blast
AMSPPSPSSA PREGHYRGVR KRPWGRYAAE IRDPWKKTRV WLGTFDTPEE AALAYDGAAR  60
SLRGTKAKTN FP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-231572563ATERF1
3gcc_A5e-231572563ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00645PBMTransfer from LOC_Os05g41760Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003593626.12e-39ethylene-responsive transcription factor 12
SwissprotQ94ID61e-36ERF81_ARATH; Ethylene-responsive transcription factor 12
TrEMBLG7ISE46e-38G7ISE4_MEDTR; Ethylene response factor
STRINGAES638779e-39(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.12e-38ERF domain protein 12