PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC023003.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family GeBP
Protein Properties Length: 113aa    MW: 12991.9 Da    PI: 11.3459
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC023003.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57333.41.3e-1031110598
        DUF573   5 rlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                   r++seeDei+lL  l     ++ + +  d+d     + +s+ +k+++ q+  Ki r++ K+++k ++     ++ ++++hd k+f+l++ +Wg+
  EcC023003.10  31 RIFSEEDEILLLSKL-----DRPSLSPTDLD----RIGESLGSKFTRVQIQRKIGRFRAKYRRKAET-----KVLIKTAHDLKVFDLARNLWGK 110
                   99********99754.....55555556765....6788999********************99999.....899*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.5E-1031109IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    Send to blast
MSLRLPSSPS SARSSDDRLP AGQQQEPRRG RIFSEEDEIL LLSKLDRPSL SPTDLDRIGE  60
SLGSKFTRVQ IQRKIGRFRA KYRRKAETKV LIKTAHDLKV FDLARNLWGK ERS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010045293.11e-28PREDICTED: uncharacterized protein LOC104434041
TrEMBLA0A059DA767e-28A0A059DA76_EUCGR; Uncharacterized protein
STRINGXP_010045293.15e-28(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17149810
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01260.12e-07DNA-binding storekeeper protein-related transcriptional regulator