PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC024292.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family GeBP
Protein Properties Length: 60aa    MW: 7016.96 Da    PI: 10.2177
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC024292.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57336.41.4e-112956229
        DUF573  2 lfqrlwseeDeivlLqGlidfkaktgks 29
                  lfqrlw++eDei lL+G++d+++++g  
  EcC024292.10 29 LFQRLWTDEDEIELLRGFLDYTMQRGRA 56
                  79***********************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045047.5E-83056IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 60 aa     Download sequence    Send to blast
RLPRPPNRRH DPPSELKWPS SAVTVAKTLF QRLWTDEDEI ELLRGFLDYT MQRGRASPSP
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM30982764
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.21e-12DNA-binding storekeeper protein-related transcriptional regulator